Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Sssca1P56873 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sssca1P56873 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Sssca1P56873 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sssca1P56873 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sssca1P56873 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sssca1P56873 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Sssca1P56873 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sssca1P56873 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sssca1P56873 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sssca1P56873 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Sssca1P56873 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sssca1P56873 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sssca1P56873 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sssca1P56873 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.58□□□□□ -0.24
Sssca1P56873 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.58□□□□□ -0.24
Sssca1P56873 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sssca1P56873 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sssca1P56873 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.58□□□□□ -0.24
Sssca1P56873 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Dio3-201ENSMUST00000097228 1449 ntBASIC13.57□□□□□ -0.24
Sssca1P56873 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.57□□□□□ -0.24
Sssca1P56873 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Gm27405-201ENSMUST00000184201 112 ntBASIC13.57□□□□□ -0.24
Sssca1P56873 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.57□□□□□ -0.24
Sssca1P56873 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sssca1P56873 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.57□□□□□ -0.24
Sssca1P56873 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.57□□□□□ -0.24
Sssca1P56873 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sssca1P56873 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sssca1P56873 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sssca1P56873 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Sssca1P56873 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sssca1P56873 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sssca1P56873 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.56□□□□□ -0.24
Sssca1P56873 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.56□□□□□ -0.24
Sssca1P56873 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.56□□□□□ -0.24
Sssca1P56873 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sssca1P56873 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.56□□□□□ -0.24
Sssca1P56873 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sssca1P56873 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sssca1P56873 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.56□□□□□ -0.24
Sssca1P56873 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sssca1P56873 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sssca1P56873 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sssca1P56873 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.55□□□□□ -0.24
Sssca1P56873 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sssca1P56873 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms