Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Atxn1P54254 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atxn1P54254 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn1P54254 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.62■□□□□ 0.25
Atxn1P54254 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atxn1P54254 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.61■□□□□ 0.25
Atxn1P54254 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atxn1P54254 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Atxn1P54254 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.61■□□□□ 0.25
Atxn1P54254 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.61■□□□□ 0.25
Atxn1P54254 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.61■□□□□ 0.25
Atxn1P54254 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.61■□□□□ 0.25
Atxn1P54254 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
Atxn1P54254 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn1P54254 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.61■□□□□ 0.25
Atxn1P54254 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.6■□□□□ 0.25
Atxn1P54254 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atxn1P54254 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atxn1P54254 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Atxn1P54254 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.6■□□□□ 0.25
Atxn1P54254 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.6■□□□□ 0.25
Atxn1P54254 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.6■□□□□ 0.25
Atxn1P54254 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn1P54254 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Atxn1P54254 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atxn1P54254 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.59■□□□□ 0.25
Atxn1P54254 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.59■□□□□ 0.25
Atxn1P54254 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.59■□□□□ 0.25
Atxn1P54254 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Atxn1P54254 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.59■□□□□ 0.25
Atxn1P54254 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.59■□□□□ 0.25
Atxn1P54254 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn1P54254 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Atxn1P54254 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Atxn1P54254 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.58■□□□□ 0.24
Atxn1P54254 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.58■□□□□ 0.24
Atxn1P54254 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Atxn1P54254 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Atxn1P54254 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn1P54254 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms