Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.92■□□□□ 0.46
HttP42859 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HttP42859 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Gm5682-201ENSMUST00000173402 505 ntBASIC17.91■□□□□ 0.46
HttP42859 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.91■□□□□ 0.46
HttP42859 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.91■□□□□ 0.46
HttP42859 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.91■□□□□ 0.46
HttP42859 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HttP42859 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HttP42859 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HttP42859 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HttP42859 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.9■□□□□ 0.46
HttP42859 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.9■□□□□ 0.46
HttP42859 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HttP42859 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HttP42859 Grk6-207ENSMUST00000225925 2769 ntBASIC17.9■□□□□ 0.46
HttP42859 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.9■□□□□ 0.46
HttP42859 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HttP42859 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.9■□□□□ 0.46
HttP42859 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HttP42859 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HttP42859 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HttP42859 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HttP42859 Gm12428-201ENSMUST00000119844 727 ntBASIC17.89■□□□□ 0.46
HttP42859 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HttP42859 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HttP42859 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HttP42859 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.89■□□□□ 0.45
HttP42859 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HttP42859 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
HttP42859 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 Gm4459-201ENSMUST00000118750 468 ntBASIC17.89■□□□□ 0.45
HttP42859 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HttP42859 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.89■□□□□ 0.45
HttP42859 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.88■□□□□ 0.45
HttP42859 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HttP42859 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.88■□□□□ 0.45
HttP42859 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HttP42859 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HttP42859 Mir6977-201ENSMUST00000184960 64 ntBASIC17.88■□□□□ 0.45
HttP42859 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HttP42859 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HttP42859 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.87■□□□□ 0.45
HttP42859 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.87■□□□□ 0.45
HttP42859 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.87■□□□□ 0.45
HttP42859 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.87■□□□□ 0.45
HttP42859 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.87■□□□□ 0.45
HttP42859 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HttP42859 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.87■□□□□ 0.45
HttP42859 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
HttP42859 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HttP42859 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HttP42859 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.86■□□□□ 0.45
HttP42859 Gm27646-201ENSMUST00000183989 110 ntBASIC17.86■□□□□ 0.45
HttP42859 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.86■□□□□ 0.45
HttP42859 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HttP42859 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HttP42859 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HttP42859 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.86■□□□□ 0.45
HttP42859 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HttP42859 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HttP42859 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms