Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmx3P42581 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmx3P42581 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmx3P42581 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmx3P42581 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.03□□□□□ -0.16
Hmx3P42581 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmx3P42581 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmx3P42581 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hmx3P42581 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmx3P42581 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmx3P42581 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.02□□□□□ -0.16
Hmx3P42581 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmx3P42581 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hmx3P42581 Gm13148-201ENSMUST00000118892 745 ntBASIC14.02□□□□□ -0.17
Hmx3P42581 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmx3P42581 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmx3P42581 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hmx3P42581 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.02□□□□□ -0.17
Hmx3P42581 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hmx3P42581 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmx3P42581 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmx3P42581 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Hmx3P42581 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hmx3P42581 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.01□□□□□ -0.17
Hmx3P42581 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.01□□□□□ -0.17
Hmx3P42581 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hmx3P42581 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hmx3P42581 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hmx3P42581 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.01□□□□□ -0.17
Hmx3P42581 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmx3P42581 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hmx3P42581 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Hmx3P42581 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Hmx3P42581 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmx3P42581 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Hmx3P42581 Gm37179-201ENSMUST00000194862 823 ntBASIC14□□□□□ -0.17
Hmx3P42581 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14□□□□□ -0.17
Hmx3P42581 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hmx3P42581 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Hmx3P42581 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14□□□□□ -0.17
Hmx3P42581 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmx3P42581 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmx3P42581 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hmx3P42581 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmx3P42581 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.99□□□□□ -0.17
Hmx3P42581 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmx3P42581 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmx3P42581 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms