Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Mmp9P41245 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.11□□□□□ -0.15
Mmp9P41245 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.11□□□□□ -0.15
Mmp9P41245 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp9P41245 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Mmp9P41245 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Mmp9P41245 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Mmp9P41245 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp9P41245 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Mmp9P41245 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Mmp9P41245 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp9P41245 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp9P41245 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Mmp9P41245 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mmp9P41245 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp9P41245 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp9P41245 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.09□□□□□ -0.15
Mmp9P41245 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Mmp9P41245 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Mmp9P41245 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Mmp9P41245 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.09□□□□□ -0.15
Mmp9P41245 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.09□□□□□ -0.15
Mmp9P41245 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.09□□□□□ -0.15
Mmp9P41245 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.09□□□□□ -0.15
Mmp9P41245 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Mmp9P41245 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Gm4968-201ENSMUST00000071458 858 ntBASIC14.09□□□□□ -0.15
Mmp9P41245 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Mmp9P41245 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Mmp9P41245 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp9P41245 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.08□□□□□ -0.16
Mmp9P41245 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms