Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Abca1P41233 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Abca1P41233 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.88□□□□□ -0.19
Abca1P41233 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.88□□□□□ -0.19
Abca1P41233 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Abca1P41233 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Abca1P41233 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Abca1P41233 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.88□□□□□ -0.19
Abca1P41233 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Abca1P41233 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.88□□□□□ -0.19
Abca1P41233 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Abca1P41233 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.88□□□□□ -0.19
Abca1P41233 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca1P41233 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.88□□□□□ -0.19
Abca1P41233 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Abca1P41233 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Abca1P41233 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.87□□□□□ -0.19
Abca1P41233 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 AW822252-206ENSMUST00000208904 237 ntBASIC13.87□□□□□ -0.19
Abca1P41233 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Abca1P41233 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Abca1P41233 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.87□□□□□ -0.19
Abca1P41233 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.87□□□□□ -0.19
Abca1P41233 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.87□□□□□ -0.19
Abca1P41233 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Abca1P41233 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Gm15794-201ENSMUST00000120182 631 ntBASIC13.87□□□□□ -0.19
Abca1P41233 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.87□□□□□ -0.19
Abca1P41233 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Abca1P41233 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Gm28659-201ENSMUST00000188013 759 ntBASIC13.86□□□□□ -0.19
Abca1P41233 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Abca1P41233 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Abca1P41233 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Abca1P41233 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca1P41233 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.85□□□□□ -0.19
Abca1P41233 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Abca1P41233 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Abca1P41233 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.85□□□□□ -0.19
Abca1P41233 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.85□□□□□ -0.19
Abca1P41233 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.85□□□□□ -0.19
Abca1P41233 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Abca1P41233 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca1P41233 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms