Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Hmga1P17095 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga1P17095 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga1P17095 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga1P17095 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga1P17095 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga1P17095 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmga1P17095 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga1P17095 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga1P17095 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga1P17095 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Gm24589-201ENSMUST00000116692 94 ntBASIC17.1■□□□□ 0.33
Hmga1P17095 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.1■□□□□ 0.33
Hmga1P17095 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.1■□□□□ 0.33
Hmga1P17095 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.1■□□□□ 0.33
Hmga1P17095 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.1■□□□□ 0.33
Hmga1P17095 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hmga1P17095 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga1P17095 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hmga1P17095 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.09■□□□□ 0.33
Hmga1P17095 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hmga1P17095 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Hmga1P17095 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hmga1P17095 Birc2-201ENSMUST00000054878 378 ntBASIC17.09■□□□□ 0.33
Hmga1P17095 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga1P17095 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmga1P17095 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Hmga1P17095 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Hmga1P17095 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hmga1P17095 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.08■□□□□ 0.32
Hmga1P17095 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.08■□□□□ 0.32
Hmga1P17095 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga1P17095 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hmga1P17095 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmga1P17095 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hmga1P17095 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hmga1P17095 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Gm10052-201ENSMUST00000168019 960 ntBASIC17.07■□□□□ 0.32
Hmga1P17095 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.07■□□□□ 0.32
Hmga1P17095 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hmga1P17095 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmga1P17095 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Gm44430-201ENSMUST00000203376 995 ntBASIC17.07■□□□□ 0.32
Hmga1P17095 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Gm7729-201ENSMUST00000050143 801 ntBASIC17.07■□□□□ 0.32
Hmga1P17095 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Hmga1P17095 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms