Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.61□□□□□ -0.55
Smim1P0C8K7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Gm10418-201ENSMUST00000100943 576 ntBASIC11.6□□□□□ -0.55
Smim1P0C8K7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smim1P0C8K7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.59□□□□□ -0.55
Smim1P0C8K7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Smim1P0C8K7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.59□□□□□ -0.55
Smim1P0C8K7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smim1P0C8K7 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.58□□□□□ -0.55
Smim1P0C8K7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Smim1P0C8K7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.58□□□□□ -0.56
Smim1P0C8K7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.58□□□□□ -0.56
Smim1P0C8K7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim1P0C8K7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms