Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PdgfrbP05622 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PdgfrbP05622 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.94■□□□□ 0.3
PdgfrbP05622 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.93■□□□□ 0.3
PdgfrbP05622 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.93■□□□□ 0.3
PdgfrbP05622 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.93■□□□□ 0.3
PdgfrbP05622 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.93■□□□□ 0.3
PdgfrbP05622 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.93■□□□□ 0.3
PdgfrbP05622 Gm7889-201ENSMUST00000185591 958 ntBASIC16.93■□□□□ 0.3
PdgfrbP05622 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.93■□□□□ 0.3
PdgfrbP05622 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.93■□□□□ 0.3
PdgfrbP05622 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PdgfrbP05622 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdgfrbP05622 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.92■□□□□ 0.3
PdgfrbP05622 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.92■□□□□ 0.3
PdgfrbP05622 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.92■□□□□ 0.3
PdgfrbP05622 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.92■□□□□ 0.3
PdgfrbP05622 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.92■□□□□ 0.3
PdgfrbP05622 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PdgfrbP05622 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PdgfrbP05622 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.92■□□□□ 0.3
PdgfrbP05622 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.92■□□□□ 0.3
PdgfrbP05622 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdgfrbP05622 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PdgfrbP05622 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PdgfrbP05622 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.91■□□□□ 0.3
PdgfrbP05622 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.91■□□□□ 0.3
PdgfrbP05622 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PdgfrbP05622 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PdgfrbP05622 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PdgfrbP05622 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PdgfrbP05622 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.9■□□□□ 0.3
PdgfrbP05622 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.9■□□□□ 0.3
PdgfrbP05622 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PdgfrbP05622 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.9■□□□□ 0.3
PdgfrbP05622 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.9■□□□□ 0.3
PdgfrbP05622 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PdgfrbP05622 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PdgfrbP05622 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdgfrbP05622 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PdgfrbP05622 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PdgfrbP05622 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms