Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
P04224 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
P04224 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.76□□□□□ -0.05
P04224 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.76□□□□□ -0.05
P04224 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
P04224 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.76□□□□□ -0.05
P04224 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
P04224 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P04224 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.75□□□□□ -0.05
P04224 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.75□□□□□ -0.05
P04224 Gm10033-202ENSMUST00000211874 928 ntBASIC14.75□□□□□ -0.05
P04224 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
P04224 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P04224 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
P04224 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
P04224 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.75□□□□□ -0.05
P04224 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
P04224 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
P04224 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.74□□□□□ -0.05
P04224 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.74□□□□□ -0.05
P04224 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Gm42642-201ENSMUST00000200683 355 ntBASIC14.74□□□□□ -0.05
P04224 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.74□□□□□ -0.05
P04224 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
P04224 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
P04224 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
P04224 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
P04224 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
P04224 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.73□□□□□ -0.05
P04224 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.73□□□□□ -0.05
P04224 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.73□□□□□ -0.05
P04224 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.73□□□□□ -0.05
P04224 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
P04224 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
P04224 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
P04224 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
P04224 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
P04224 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms