Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.24■□□□□ 0.35
P01878 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.24■□□□□ 0.35
P01878 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01878 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.24■□□□□ 0.35
P01878 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01878 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01878 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
P01878 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01878 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.23■□□□□ 0.35
P01878 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
P01878 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.23■□□□□ 0.35
P01878 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.23■□□□□ 0.35
P01878 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.23■□□□□ 0.35
P01878 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.23■□□□□ 0.35
P01878 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.23■□□□□ 0.35
P01878 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.23■□□□□ 0.35
P01878 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.23■□□□□ 0.35
P01878 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01878 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Gm7862-201ENSMUST00000121461 292 ntBASIC17.22■□□□□ 0.35
P01878 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.22■□□□□ 0.35
P01878 Gm18733-201ENSMUST00000173950 856 ntBASIC17.22■□□□□ 0.35
P01878 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.22■□□□□ 0.35
P01878 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
P01878 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.22■□□□□ 0.35
P01878 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01878 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.21■□□□□ 0.35
P01878 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
P01878 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.21■□□□□ 0.35
P01878 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.21■□□□□ 0.35
P01878 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
P01878 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
P01878 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01878 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
P01878 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P01878 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.2■□□□□ 0.34
P01878 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Gm18195-201ENSMUST00000207604 706 ntBASIC17.2■□□□□ 0.34
P01878 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.2■□□□□ 0.34
P01878 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
P01878 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
P01878 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
P01878 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
P01878 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
P01878 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.2■□□□□ 0.34
P01878 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
P01878 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01878 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.19■□□□□ 0.34
P01878 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
P01878 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01878 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
P01878 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P01878 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P01878 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P01878 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01878 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01878 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
P01878 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms