Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
DhfrP00375 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DhfrP00375 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DhfrP00375 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DhfrP00375 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Gm13158-201ENSMUST00000122007 736 ntBASIC15.16■□□□□ 0.02
DhfrP00375 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.16■□□□□ 0.02
DhfrP00375 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DhfrP00375 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
DhfrP00375 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DhfrP00375 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
DhfrP00375 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.15■□□□□ 0.02
DhfrP00375 Gm8520-201ENSMUST00000186517 868 ntBASIC15.15■□□□□ 0.02
DhfrP00375 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.15■□□□□ 0.02
DhfrP00375 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
DhfrP00375 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
DhfrP00375 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
DhfrP00375 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
DhfrP00375 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
DhfrP00375 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
DhfrP00375 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.14■□□□□ 0.01
DhfrP00375 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Gm12527-201ENSMUST00000117967 564 ntBASIC15.14■□□□□ 0.01
DhfrP00375 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.14■□□□□ 0.01
DhfrP00375 Gm37856-201ENSMUST00000191634 999 ntBASIC15.14■□□□□ 0.01
DhfrP00375 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.14■□□□□ 0.01
DhfrP00375 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
DhfrP00375 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.14■□□□□ 0.01
DhfrP00375 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DhfrP00375 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
DhfrP00375 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
DhfrP00375 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
DhfrP00375 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Gm10138-203ENSMUST00000206952 366 ntBASIC15.13■□□□□ 0.01
DhfrP00375 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.13■□□□□ 0.01
DhfrP00375 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DhfrP00375 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
DhfrP00375 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DhfrP00375 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
DhfrP00375 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DhfrP00375 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DhfrP00375 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DhfrP00375 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DhfrP00375 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms