Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Syn1O88935 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Syn1O88935 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Syn1O88935 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Syn1O88935 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Syn1O88935 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Syn1O88935 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syn1O88935 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Syn1O88935 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Gm15173-201ENSMUST00000122049 433 ntBASIC17.23■□□□□ 0.35
Syn1O88935 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Syn1O88935 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Syn1O88935 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Syn1O88935 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.23■□□□□ 0.35
Syn1O88935 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Syn1O88935 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Syn1O88935 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syn1O88935 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Syn1O88935 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.22■□□□□ 0.35
Syn1O88935 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.22■□□□□ 0.35
Syn1O88935 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Syn1O88935 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Syn1O88935 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Syn1O88935 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Syn1O88935 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syn1O88935 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.21■□□□□ 0.35
Syn1O88935 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Syn1O88935 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Syn1O88935 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.21■□□□□ 0.35
Syn1O88935 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.21■□□□□ 0.35
Syn1O88935 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.21■□□□□ 0.35
Syn1O88935 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.21■□□□□ 0.35
Syn1O88935 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.21■□□□□ 0.35
Syn1O88935 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syn1O88935 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Syn1O88935 Phf7-203ENSMUST00000226565 1971 ntBASIC17.2■□□□□ 0.34
Syn1O88935 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Syn1O88935 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.2■□□□□ 0.34
Syn1O88935 Gm6089-201ENSMUST00000197666 938 ntBASIC17.2■□□□□ 0.34
Syn1O88935 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.2■□□□□ 0.34
Syn1O88935 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms