Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Apaf1O88879 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Apaf1O88879 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Apaf1O88879 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Apaf1O88879 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Gm7367-201ENSMUST00000057611 492 ntBASIC21.8■■□□□ 1.08
Apaf1O88879 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Apaf1O88879 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.8■■□□□ 1.08
Apaf1O88879 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.79■■□□□ 1.08
Apaf1O88879 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.79■■□□□ 1.08
Apaf1O88879 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Gm11950-201ENSMUST00000121615 838 ntBASIC21.79■■□□□ 1.08
Apaf1O88879 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Apaf1O88879 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Apaf1O88879 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Apaf1O88879 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.78■■□□□ 1.08
Apaf1O88879 Zfp264-201ENSMUST00000208656 1563 ntBASIC21.78■■□□□ 1.08
Apaf1O88879 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.78■■□□□ 1.08
Apaf1O88879 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
Apaf1O88879 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.78■■□□□ 1.08
Apaf1O88879 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.78■■□□□ 1.08
Apaf1O88879 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.78■■□□□ 1.08
Apaf1O88879 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.78■■□□□ 1.08
Apaf1O88879 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Apaf1O88879 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Apaf1O88879 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Apaf1O88879 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.77■■□□□ 1.08
Apaf1O88879 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Apaf1O88879 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.77■■□□□ 1.08
Apaf1O88879 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Apaf1O88879 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Apaf1O88879 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Apaf1O88879 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Apaf1O88879 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Apaf1O88879 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Apaf1O88879 Gm7284-201ENSMUST00000131667 944 ntBASIC21.76■■□□□ 1.07
Apaf1O88879 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Apaf1O88879 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.76■■□□□ 1.07
Apaf1O88879 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Apaf1O88879 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Apaf1O88879 Gm27704-201ENSMUST00000185094 107 ntBASIC21.76■■□□□ 1.07
Apaf1O88879 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.76■■□□□ 1.07
Apaf1O88879 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Apaf1O88879 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Apaf1O88879 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Apaf1O88879 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Apaf1O88879 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Apaf1O88879 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Apaf1O88879 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Apaf1O88879 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Apaf1O88879 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Apaf1O88879 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Apaf1O88879 Gm10819-201ENSMUST00000099988 561 ntBASIC21.75■■□□□ 1.07
Apaf1O88879 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Apaf1O88879 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms