Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cops4O88544 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cops4O88544 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cops4O88544 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cops4O88544 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cops4O88544 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cops4O88544 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cops4O88544 Gm12933-201ENSMUST00000120203 872 ntBASIC15.52■□□□□ 0.08
Cops4O88544 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cops4O88544 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cops4O88544 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cops4O88544 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cops4O88544 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cops4O88544 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cops4O88544 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.51■□□□□ 0.07
Cops4O88544 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cops4O88544 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cops4O88544 Gm37179-201ENSMUST00000194862 823 ntBASIC15.51■□□□□ 0.07
Cops4O88544 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.51■□□□□ 0.07
Cops4O88544 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.51■□□□□ 0.07
Cops4O88544 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cops4O88544 Zfp783-201ENSMUST00000095946 670 ntBASIC15.51■□□□□ 0.07
Cops4O88544 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Cops4O88544 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Cops4O88544 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cops4O88544 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.5■□□□□ 0.07
Cops4O88544 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cops4O88544 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cops4O88544 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.5■□□□□ 0.07
Cops4O88544 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cops4O88544 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Cops4O88544 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Gm15039-201ENSMUST00000118914 875 ntBASIC15.5■□□□□ 0.07
Cops4O88544 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.5■□□□□ 0.07
Cops4O88544 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cops4O88544 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cops4O88544 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.49■□□□□ 0.07
Cops4O88544 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cops4O88544 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.49■□□□□ 0.07
Cops4O88544 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.49■□□□□ 0.07
Cops4O88544 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.49■□□□□ 0.07
Cops4O88544 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Cops4O88544 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
Cops4O88544 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.49■□□□□ 0.07
Cops4O88544 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cops4O88544 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cops4O88544 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms