Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.24■□□□□ 0.03
Alx3O70137 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Alx3O70137 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Gm17661-201ENSMUST00000170317 270 ntBASIC15.24■□□□□ 0.03
Alx3O70137 Gm37025-201ENSMUST00000195159 829 ntBASIC15.24■□□□□ 0.03
Alx3O70137 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Alx3O70137 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Alx3O70137 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.24■□□□□ 0.03
Alx3O70137 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx3O70137 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.23■□□□□ 0.03
Alx3O70137 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.23■□□□□ 0.03
Alx3O70137 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Alx3O70137 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.23■□□□□ 0.03
Alx3O70137 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Alx3O70137 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Alx3O70137 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.23■□□□□ 0.03
Alx3O70137 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Alx3O70137 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Alx3O70137 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx3O70137 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Alx3O70137 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Alx3O70137 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.22■□□□□ 0.03
Alx3O70137 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Alx3O70137 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Alx3O70137 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Alx3O70137 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Alx3O70137 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx3O70137 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.21■□□□□ 0.03
Alx3O70137 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Alx3O70137 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.21■□□□□ 0.03
Alx3O70137 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.21■□□□□ 0.03
Alx3O70137 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Alx3O70137 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx3O70137 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx3O70137 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.21■□□□□ 0.02
Alx3O70137 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx3O70137 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Alx3O70137 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx3O70137 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Alx3O70137 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Alx3O70137 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx3O70137 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Alx3O70137 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx3O70137 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx3O70137 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx3O70137 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.2■□□□□ 0.02
Alx3O70137 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alx3O70137 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms