Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Pde6dO55057 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.29□□□□□ -0.28
Pde6dO55057 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.29□□□□□ -0.28
Pde6dO55057 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pde6dO55057 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Pde6dO55057 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Pde6dO55057 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6dO55057 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pde6dO55057 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.28□□□□□ -0.28
Pde6dO55057 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pde6dO55057 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pde6dO55057 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pde6dO55057 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.28□□□□□ -0.28
Pde6dO55057 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.28□□□□□ -0.28
Pde6dO55057 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pde6dO55057 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pde6dO55057 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.28□□□□□ -0.28
Pde6dO55057 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6dO55057 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Pde6dO55057 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6dO55057 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Pde6dO55057 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6dO55057 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6dO55057 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6dO55057 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pde6dO55057 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6dO55057 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pde6dO55057 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.27□□□□□ -0.29
Pde6dO55057 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Gm38285-201ENSMUST00000192928 922 ntBASIC13.27□□□□□ -0.29
Pde6dO55057 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.27□□□□□ -0.29
Pde6dO55057 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.27□□□□□ -0.29
Pde6dO55057 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Pde6dO55057 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Pde6dO55057 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Pde6dO55057 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6dO55057 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pde6dO55057 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6dO55057 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6dO55057 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6dO55057 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6dO55057 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6dO55057 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6dO55057 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6dO55057 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pde6dO55057 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms