Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Banf1O54962 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Banf1O54962 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Banf1O54962 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Banf1O54962 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Banf1O54962 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.08■□□□□ 0.32
Banf1O54962 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Banf1O54962 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Banf1O54962 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Banf1O54962 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Banf1O54962 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Banf1O54962 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Banf1O54962 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Banf1O54962 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Banf1O54962 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.07■□□□□ 0.32
Banf1O54962 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Gm27000-201ENSMUST00000182943 842 ntBASIC17.07■□□□□ 0.32
Banf1O54962 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Banf1O54962 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Banf1O54962 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.07■□□□□ 0.32
Banf1O54962 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Banf1O54962 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.06■□□□□ 0.32
Banf1O54962 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Banf1O54962 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Banf1O54962 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Gm29257-201ENSMUST00000186115 639 ntBASIC17.06■□□□□ 0.32
Banf1O54962 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Banf1O54962 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Banf1O54962 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Banf1O54962 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Gm37025-201ENSMUST00000195159 829 ntBASIC17.05■□□□□ 0.32
Banf1O54962 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.05■□□□□ 0.32
Banf1O54962 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Banf1O54962 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Banf1O54962 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Banf1O54962 Gm15378-201ENSMUST00000121894 207 ntBASIC17.04■□□□□ 0.32
Banf1O54962 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Gm10653-202ENSMUST00000139570 835 ntBASIC17.04■□□□□ 0.32
Banf1O54962 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.04■□□□□ 0.32
Banf1O54962 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.04■□□□□ 0.32
Banf1O54962 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Banf1O54962 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.04■□□□□ 0.32
Banf1O54962 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms