Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufa1O35683 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufa1O35683 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufa1O35683 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ndufa1O35683 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufa1O35683 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufa1O35683 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndufa1O35683 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ndufa1O35683 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ndufa1O35683 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndufa1O35683 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ndufa1O35683 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.08□□□□□ -0.48
Ndufa1O35683 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndufa1O35683 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Ndufa1O35683 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ndufa1O35683 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ndufa1O35683 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndufa1O35683 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndufa1O35683 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.07□□□□□ -0.48
Ndufa1O35683 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Mir8112-201ENSMUST00000184382 131 ntBASIC12.07□□□□□ -0.48
Ndufa1O35683 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndufa1O35683 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa1O35683 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Gm7290-201ENSMUST00000104990 617 ntBASIC12.06□□□□□ -0.48
Ndufa1O35683 Gm12918-201ENSMUST00000120234 636 ntBASIC12.06□□□□□ -0.48
Ndufa1O35683 Gm15710-201ENSMUST00000121821 636 ntBASIC12.06□□□□□ -0.48
Ndufa1O35683 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Gm5075-201ENSMUST00000196916 622 ntBASIC12.06□□□□□ -0.48
Ndufa1O35683 Gm42569-201ENSMUST00000200539 472 ntBASIC12.06□□□□□ -0.48
Ndufa1O35683 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.06□□□□□ -0.48
Ndufa1O35683 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.06□□□□□ -0.48
Ndufa1O35683 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ndufa1O35683 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa1O35683 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.06□□□□□ -0.48
Ndufa1O35683 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa1O35683 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa1O35683 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa1O35683 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa1O35683 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa1O35683 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms