Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1i3O35627 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1i3O35627 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.02■□□□□ 0.48
Nr1i3O35627 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1i3O35627 Gm8520-201ENSMUST00000186517 868 ntBASIC18.02■□□□□ 0.48
Nr1i3O35627 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Nr1i3O35627 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Nr1i3O35627 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1i3O35627 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1i3O35627 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1i3O35627 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.01■□□□□ 0.47
Nr1i3O35627 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nr1i3O35627 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.01■□□□□ 0.47
Nr1i3O35627 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.01■□□□□ 0.47
Nr1i3O35627 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.01■□□□□ 0.47
Nr1i3O35627 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.01■□□□□ 0.47
Nr1i3O35627 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.01■□□□□ 0.47
Nr1i3O35627 Gm3375-201ENSMUST00000203929 796 ntBASIC18.01■□□□□ 0.47
Nr1i3O35627 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Nr1i3O35627 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1i3O35627 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Nr1i3O35627 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Nr1i3O35627 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nr1i3O35627 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Nr1i3O35627 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Nr1i3O35627 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18■□□□□ 0.47
Nr1i3O35627 Gm21814-202ENSMUST00000203277 873 ntBASIC18■□□□□ 0.47
Nr1i3O35627 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Nr1i3O35627 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Nr1i3O35627 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18■□□□□ 0.47
Nr1i3O35627 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18■□□□□ 0.47
Nr1i3O35627 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1i3O35627 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Nr1i3O35627 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.99■□□□□ 0.47
Nr1i3O35627 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.99■□□□□ 0.47
Nr1i3O35627 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Nr1i3O35627 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Gm715-201ENSMUST00000117865 831 ntBASIC17.99■□□□□ 0.47
Nr1i3O35627 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.99■□□□□ 0.47
Nr1i3O35627 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1i3O35627 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.98■□□□□ 0.47
Nr1i3O35627 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.98■□□□□ 0.47
Nr1i3O35627 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.98■□□□□ 0.47
Nr1i3O35627 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nr1i3O35627 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1i3O35627 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms