Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Stx1aO35526 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Stx1aO35526 Gm12382-201ENSMUST00000122005 922 ntBASIC18.9■□□□□ 0.62
Stx1aO35526 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Stx1aO35526 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Gm8495-201ENSMUST00000188740 694 ntBASIC18.9■□□□□ 0.62
Stx1aO35526 Gm37292-201ENSMUST00000192062 758 ntBASIC18.9■□□□□ 0.62
Stx1aO35526 Gm10517-202ENSMUST00000192970 758 ntBASIC18.9■□□□□ 0.62
Stx1aO35526 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.9■□□□□ 0.62
Stx1aO35526 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Stx1aO35526 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Stx1aO35526 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Stx1aO35526 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Stx1aO35526 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.89■□□□□ 0.61
Stx1aO35526 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.89■□□□□ 0.61
Stx1aO35526 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.89■□□□□ 0.61
Stx1aO35526 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stx1aO35526 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.88■□□□□ 0.61
Stx1aO35526 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.88■□□□□ 0.61
Stx1aO35526 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.88■□□□□ 0.61
Stx1aO35526 Gm17661-201ENSMUST00000170317 270 ntBASIC18.88■□□□□ 0.61
Stx1aO35526 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.88■□□□□ 0.61
Stx1aO35526 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Stx1aO35526 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Stx1aO35526 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stx1aO35526 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stx1aO35526 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Stx1aO35526 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stx1aO35526 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.87■□□□□ 0.61
Stx1aO35526 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Stx1aO35526 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stx1aO35526 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.87■□□□□ 0.61
Stx1aO35526 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Stx1aO35526 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Stx1aO35526 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Stx1aO35526 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stx1aO35526 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stx1aO35526 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stx1aO35526 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stx1aO35526 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.86■□□□□ 0.61
Stx1aO35526 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.86■□□□□ 0.61
Stx1aO35526 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.86■□□□□ 0.61
Stx1aO35526 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Stx1aO35526 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stx1aO35526 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.85■□□□□ 0.61
Stx1aO35526 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Stx1aO35526 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.85■□□□□ 0.61
Stx1aO35526 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Stx1aO35526 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.85■□□□□ 0.61
Stx1aO35526 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.85■□□□□ 0.61
Stx1aO35526 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Stx1aO35526 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.85■□□□□ 0.61
Stx1aO35526 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms