Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Mir2861-201ENSMUST00000175539 82 ntBASIC13.11□□□□□ -0.31
Tnfsf11O35235 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Tnfsf11O35235 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.1□□□□□ -0.31
Tnfsf11O35235 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf11O35235 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf11O35235 Gm42642-201ENSMUST00000200683 355 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms