Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 Gm13418-201ENSMUST00000119097 944 ntBASIC21.48■■□□□ 1.03
Col15a1O35206 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.48■■□□□ 1.03
Col15a1O35206 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col15a1O35206 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Col15a1O35206 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col15a1O35206 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col15a1O35206 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col15a1O35206 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col15a1O35206 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Col15a1O35206 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC21.47■■□□□ 1.03
Col15a1O35206 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21.47■■□□□ 1.03
Col15a1O35206 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC21.47■■□□□ 1.03
Col15a1O35206 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col15a1O35206 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col15a1O35206 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.47■■□□□ 1.03
Col15a1O35206 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.46■■□□□ 1.03
Col15a1O35206 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col15a1O35206 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Col15a1O35206 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col15a1O35206 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col15a1O35206 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Col15a1O35206 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col15a1O35206 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col15a1O35206 Gm8000-201ENSMUST00000188378 592 ntBASIC21.46■■□□□ 1.03
Col15a1O35206 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21.46■■□□□ 1.03
Col15a1O35206 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC21.46■■□□□ 1.03
Col15a1O35206 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col15a1O35206 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col15a1O35206 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.45■■□□□ 1.02
Col15a1O35206 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col15a1O35206 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.45■■□□□ 1.02
Col15a1O35206 Gm11594-201ENSMUST00000122313 162 ntBASIC21.45■■□□□ 1.02
Col15a1O35206 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Col15a1O35206 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC21.45■■□□□ 1.02
Col15a1O35206 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Col15a1O35206 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Col15a1O35206 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Col15a1O35206 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col15a1O35206 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col15a1O35206 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Col15a1O35206 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.44■■□□□ 1.02
Col15a1O35206 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Col15a1O35206 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col15a1O35206 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col15a1O35206 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col15a1O35206 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col15a1O35206 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col15a1O35206 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col15a1O35206 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col15a1O35206 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.43■■□□□ 1.02
Col15a1O35206 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Col15a1O35206 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Col15a1O35206 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.43■■□□□ 1.02
Col15a1O35206 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.43■■□□□ 1.02
Col15a1O35206 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.43■■□□□ 1.02
Col15a1O35206 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Gm7230-201ENSMUST00000173026 815 ntBASIC21.43■■□□□ 1.02
Col15a1O35206 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Gm4535-201ENSMUST00000182274 558 ntBASIC21.43■■□□□ 1.02
Col15a1O35206 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.43■■□□□ 1.02
Col15a1O35206 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.43■■□□□ 1.02
Col15a1O35206 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Gm10355-201ENSMUST00000097146 517 ntBASIC21.43■■□□□ 1.02
Col15a1O35206 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Col15a1O35206 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col15a1O35206 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col15a1O35206 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col15a1O35206 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Col15a1O35206 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col15a1O35206 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col15a1O35206 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.42■■□□□ 1.02
Col15a1O35206 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC21.42■■□□□ 1.02
Col15a1O35206 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC21.42■■□□□ 1.02
Col15a1O35206 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.42■■□□□ 1.02
Col15a1O35206 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Col15a1O35206 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.42■■□□□ 1.02
Col15a1O35206 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Col15a1O35206 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col15a1O35206 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Col15a1O35206 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.42■■□□□ 1.02
Col15a1O35206 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.42■■□□□ 1.02
Col15a1O35206 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col15a1O35206 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col15a1O35206 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col15a1O35206 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col15a1O35206 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col15a1O35206 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms