Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
B020004C17RikJ3QP07 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Gm11779-201ENSMUST00000118541 368 ntBASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Psmb5-202ENSMUST00000227257 622 ntBASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
B020004C17RikJ3QP07 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
B020004C17RikJ3QP07 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Gm13418-201ENSMUST00000119097 944 ntBASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Gm5264-201ENSMUST00000190584 848 ntBASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
B020004C17RikJ3QP07 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Gm11594-201ENSMUST00000122313 162 ntBASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Gm2213-201ENSMUST00000197485 688 ntBASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Gm7506-201ENSMUST00000207758 815 ntBASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
B020004C17RikJ3QP07 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms