Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf4lE9Q2N0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.21□□□□□ -0.14
Cpsf4lE9Q2N0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf4lE9Q2N0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf4lE9Q2N0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Gm10231-201ENSMUST00000181584 441 ntBASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Gm10175-202ENSMUST00000208752 441 ntBASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4lE9Q2N0 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4lE9Q2N0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Gm26039-201ENSMUST00000158152 144 ntBASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Gm18032-201ENSMUST00000222541 538 ntBASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf4lE9Q2N0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf4lE9Q2N0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms