Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Mir449b-201ENSMUST00000104833 80 ntBASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Gm45612-201ENSMUST00000211320 160 ntBASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a3E9PWQ3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a3E9PWQ3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a3E9PWQ3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Gm18062-201ENSMUST00000208020 547 ntBASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Gm18055-201ENSMUST00000208254 547 ntBASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.71■□□□□ 0.27
Col6a3E9PWQ3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Col6a3E9PWQ3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Col6a3E9PWQ3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.71■□□□□ 0.26
Col6a3E9PWQ3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.71■□□□□ 0.26
Col6a3E9PWQ3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
Col6a3E9PWQ3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.71■□□□□ 0.26
Col6a3E9PWQ3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms