Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Gm37292-201ENSMUST00000192062 758 ntBASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28043E0CXC2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Gm13401-201ENSMUST00000117074 291 ntBASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28043E0CXC2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm28043E0CXC2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm28043E0CXC2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Gm28043E0CXC2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm28043E0CXC2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28043E0CXC2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Gm6576-201ENSMUST00000169678 883 ntBASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Gm22240-201ENSMUST00000175225 82 ntBASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Gm43183-201ENSMUST00000200632 547 ntBASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28043E0CXC2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Gm12382-201ENSMUST00000122005 922 ntBASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.81■□□□□ 0.28
Gm28043E0CXC2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28043E0CXC2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms