Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim30cD3YVI9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim30cD3YVI9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim30cD3YVI9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim30cD3YVI9 Mir6982-201ENSMUST00000184354 68 ntBASIC18.33■□□□□ 0.52
Trim30cD3YVI9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim30cD3YVI9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim30cD3YVI9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim30cD3YVI9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim30cD3YVI9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim30cD3YVI9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim30cD3YVI9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Gm10418-201ENSMUST00000100943 576 ntBASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim30cD3YVI9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Dancr-204ENSMUST00000132389 2347 ntBASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim30cD3YVI9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Mir5122-201ENSMUST00000175004 89 ntBASIC18.3■□□□□ 0.52
Trim30cD3YVI9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim30cD3YVI9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim30cD3YVI9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms