Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col6a5A6H584 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a5A6H584 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.64□□□□□ -0.39
Col6a5A6H584 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Col6a5A6H584 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a5A6H584 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Col6a5A6H584 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.64□□□□□ -0.39
Col6a5A6H584 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.64□□□□□ -0.39
Col6a5A6H584 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col6a5A6H584 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a5A6H584 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.63□□□□□ -0.39
Col6a5A6H584 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.63□□□□□ -0.39
Col6a5A6H584 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.63□□□□□ -0.39
Col6a5A6H584 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col6a5A6H584 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col6a5A6H584 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col6a5A6H584 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Col6a5A6H584 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Col6a5A6H584 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a5A6H584 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Col6a5A6H584 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Gm44450-201ENSMUST00000199528 114 ntBASIC12.62□□□□□ -0.39
Col6a5A6H584 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.62□□□□□ -0.39
Col6a5A6H584 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Col6a5A6H584 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a5A6H584 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Col6a5A6H584 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col6a5A6H584 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.62□□□□□ -0.39
Col6a5A6H584 Hsf1-204ENSMUST00000226872 2104 ntBASIC12.62□□□□□ -0.39
Col6a5A6H584 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col6a5A6H584 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col6a5A6H584 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.62□□□□□ -0.39
Col6a5A6H584 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a5A6H584 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.61□□□□□ -0.39
Col6a5A6H584 Gm25745-201ENSMUST00000174945 133 ntBASIC12.61□□□□□ -0.39
Col6a5A6H584 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.61□□□□□ -0.39
Col6a5A6H584 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a5A6H584 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col6a5A6H584 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col6a5A6H584 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a5A6H584 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a5A6H584 Gm7653-201ENSMUST00000214567 508 ntBASIC12.61□□□□□ -0.39
Col6a5A6H584 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.61□□□□□ -0.39
Col6a5A6H584 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.61□□□□□ -0.39
Col6a5A6H584 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Col6a5A6H584 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a5A6H584 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms