Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Gm7638-201ENSMUST00000121348 967 ntBASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc112A0AUP1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Gm38027-201ENSMUST00000192315 235 ntBASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Il3ra-202ENSMUST00000223589 738 ntBASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.15■□□□□ 0.66
Ccdc112A0AUP1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc112A0AUP1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc112A0AUP1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.14■□□□□ 0.66
Ccdc112A0AUP1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc112A0AUP1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc112A0AUP1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc112A0AUP1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms