Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lcmt1A0A0U1RNF2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lcmt1A0A0U1RNF2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lcmt1A0A0U1RNF2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lcmt1A0A0U1RNF2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Lcmt1A0A0U1RNF2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lcmt1A0A0U1RNF2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lcmt1A0A0U1RNF2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lcmt1A0A0U1RNF2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gm7791-201ENSMUST00000219066 539 ntBASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lcmt1A0A0U1RNF2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lcmt1A0A0U1RNF2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms