Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm10231-201ENSMUST00000181584 441 ntBASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm10175-202ENSMUST00000208752 441 ntBASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm4974-201ENSMUST00000209974 875 ntBASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.52□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.52□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm27463-201ENSMUST00000183569 57 ntBASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm7889-201ENSMUST00000185591 958 ntBASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms