Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm45102-201ENSMUST00000207427 857 ntBASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm40848-201ENSMUST00000221998 324 ntBASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4-3A0A0B4J1K1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4-3A0A0B4J1K1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms