Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm10602-201ENSMUST00000098239 609 ntBASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.16□□□□□ -0.46
Trbv16A0A0B4J1H3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv16A0A0B4J1H3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv16A0A0B4J1H3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv16A0A0B4J1H3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv16A0A0B4J1H3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm27275-201ENSMUST00000184318 272 ntBASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv16A0A0B4J1H3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms