Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6d-5A0A075B6B9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6d-5A0A075B6B9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6d-5A0A075B6B9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.57□□□□□ -0.24
Trav6d-5A0A075B6B9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-5A0A075B6B9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 AV356131-201ENSMUST00000206201 750 ntBASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Rab3c-203ENSMUST00000224180 967 ntBASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms