Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Gm13241-201ENSMUST00000094493 780 ntBASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Sybu-209ENSMUST00000228639 4113 ntBASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8-1A0A075B641 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav8-1A0A075B641 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Trav8-1A0A075B641 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav8-1A0A075B641 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Gm43173-201ENSMUST00000202246 593 ntBASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8-1A0A075B641 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Gm38205-201ENSMUST00000192243 258 ntBASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8-1A0A075B641 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms