Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-7-dv9A0A075B639 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Mir5122-201ENSMUST00000175004 89 ntBASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-7-dv9A0A075B639 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-7-dv9A0A075B639 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Trav6-7-dv9A0A075B639 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-7-dv9A0A075B639 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms