Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Dio3-201ENSMUST00000097228 1449 ntBASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Gm4974-201ENSMUST00000209974 875 ntBASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-1-dv6d-1A0A075B624 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-1-dv6d-1A0A075B624 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms