Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Gm18032-201ENSMUST00000222541 538 ntBASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Gm23634-201ENSMUST00000175071 91 ntBASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Trav13d-1A0A075B606 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 AA414768-201ENSMUST00000121924 1257 ntBASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-1A0A075B606 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms