Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC091153.1-201ENST00000466297 402 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC013356.1-201ENST00000489027 564 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC022133.1-201ENST00000490961 571 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 RPL12P25-202ENST00000598100 674 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 MLECP1-201ENST00000615893 709 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC107308.1-201ENST00000615897 301 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC087821.1-201ENST00000623639 567 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 NCLP2-201ENST00000416078 1462 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 SNX18P3-202ENST00000565670 1750 ntBASIC6.05□□□□□ -1.44
SNED1Q8TER0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 NR1H5P-201ENST00000452683 1377 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 RNA5SP397-201ENST00000391323 118 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 RNA5SP345-201ENST00000410646 108 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 RPL12P34-201ENST00000424532 479 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 CENPIP1-201ENST00000425713 902 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC023141.6-201ENST00000429418 337 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC116562.1-201ENST00000485355 781 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 RNA5SP116-201ENST00000516132 98 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 AL356218.2-201ENST00000605264 187 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC079791.1-201ENST00000605356 973 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AL109618.2-201ENST00000605527 211 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC011944.2-201ENST00000624440 683 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 AL022323.4-201ENST00000623980 13120 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNED1Q8TER0 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC239868.2-201ENST00000564237 4527 ntBASIC6.04□□□□□ -1.44
SNED1Q8TER0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.04□□□□□ -1.44
SNED1Q8TER0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 AC004158.1-201ENST00000564508 4319 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 RNA5SP453-201ENST00000362503 119 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 OR51B3P-201ENST00000412287 913 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 NPM1P18-201ENST00000434232 732 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 AC073143.1-201ENST00000436316 395 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 HMGB1P4-201ENST00000455362 567 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 OR2A3P-201ENST00000493774 953 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 OR8G5-201ENST00000524943 1041 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 MIR4420-201ENST00000583944 77 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 AC125494.2-201ENST00000602431 657 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 AC073091.2-201ENST00000603205 907 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 MIR6830-201ENST00000636015 70 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms