Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC233289.1-201ENST00000403700 508 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 EIF4A1P1-201ENST00000420241 934 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 RPS4XP16-201ENST00000427198 791 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 HMGN1P2-201ENST00000445197 310 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 RPL5P16-201ENST00000471467 790 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 OR9N1P-201ENST00000491296 333 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC020890.1-201ENST00000491837 504 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 RPS27AP18-201ENST00000515536 459 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 RNU6-941P-201ENST00000516346 108 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 NANOGNBP2-201ENST00000544753 553 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 RNF138P2-201ENST00000603490 592 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AP005432.2-201ENST00000608162 586 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC073575.2-201ENST00000614212 627 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AL356752.1-201ENST00000615844 593 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 AC091305.2-201ENST00000624049 1576 ntBASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC139713.2-215ENST00000641428 5037 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 SCN1A-220ENST00000641603 12506 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 RN7SKP286-201ENST00000410894 299 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 EI24P4-201ENST00000423683 1078 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC012519.1-201ENST00000424588 610 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AL450263.2-201ENST00000439400 589 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AL450023.3-201ENST00000440592 271 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AL591363.1-201ENST00000450091 483 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AL691482.1-201ENST00000453255 87 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AL133445.1-201ENST00000467051 452 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 NDUFA5P5-201ENST00000468361 342 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC094085.1-201ENST00000468914 584 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AGGF1P3-201ENST00000493675 1213 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 BTG4P1-201ENST00000510421 183 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 GTF2F2P1-201ENST00000511083 675 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 WBP1LP8-201ENST00000617401 327 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AC006840.1-201ENST00000623069 542 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 AL672167.1-205ENST00000641112 3080 ntBASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUDCD3Q8IVD9 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms