Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNA5SP132-201ENST00000364725 118 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 SNORA48.4-201ENST00000391089 134 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 RNA5SP487-201ENST00000410186 122 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.61□□□□□ -1.51
PTPN9P43378 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN9P43378 AL512637.2-201ENST00000431287 1256 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN9P43378 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 SNRPFP2-201ENST00000440710 251 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN9P43378 RNF2P1-201ENST00000442955 1010 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 AC090804.1-201ENST00000448870 490 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN9P43378 AC245100.2-201ENST00000454544 1679 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 RPL7P45-201ENST00000455851 743 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN9P43378 RN7SL547P-201ENST00000490793 290 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN9P43378 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN9P43378 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN9P43378 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.61□□□□□ -1.51
PTPN9P43378 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN9P43378 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN9P43378 AC068339.2-201ENST00000534395 618 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN9P43378 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPN9P43378 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN9P43378 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPN9P43378 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PTPN9P43378 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 AC104072.1-201ENST00000568817 668 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTPN9P43378 AC006363.1-201ENST00000603806 463 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 MIR1264-201ENST00000616374 69 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 AC023510.2-201ENST00000622162 746 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 AC079298.1-201ENST00000625026 1619 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPN9P43378 AC099654.6-201ENST00000636487 512 ntBASIC5.61□□□□□ -1.51
PTPN9P43378 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN9P43378 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PTPN9P43378 AL078621.3-201ENST00000623707 2042 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AL360270.2-201ENST00000562952 5985 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN9P43378 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN9P43378 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPN9P43378 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN9P43378 AC011503.2-201ENST00000594230 1500 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN9P43378 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN9P43378 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN9P43378 RAD1P1-201ENST00000231383 813 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN9P43378 MIR323A-201ENST00000362199 86 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 GSTA12P-201ENST00000402398 508 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN9P43378 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPN9P43378 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
PTPN9P43378 AL513325.1-201ENST00000417716 1034 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.6□□□□□ -1.51
PTPN9P43378 AC124944.2-201ENST00000429866 1242 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN9P43378 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPN9P43378 MOB1AP2-201ENST00000446060 614 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN9P43378 AC016724.1-201ENST00000453215 421 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 FCF1P6-201ENST00000456841 595 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 RN7SL447P-201ENST00000494711 245 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AL136038.1-201ENST00000497246 351 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AC104109.1-201ENST00000498563 436 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPN9P43378 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPN9P43378 SCARNA1-201ENST00000517138 166 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AC022360.1-201ENST00000521058 340 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPN9P43378 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PTPN9P43378 NOP56P3-201ENST00000549457 385 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPN9P43378 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPN9P43378 AC009027.1-201ENST00000604510 479 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN9P43378 AC007204.2-201ENST00000615022 616 ntBASIC5.6□□□□□ -1.51
PTPN9P43378 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN9P43378 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
PTPN9P43378 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PTPN9P43378 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
PTPN9P43378 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN9P43378 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms