Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ATP5HP3-201ENST00000396994 486 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TM4SF1P30408 AL139039.2-201ENST00000407436 479 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.3□□□□□ -1.4
TM4SF1P30408 CBX1P3-201ENST00000413296 527 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 VN1R31P-201ENST00000417498 730 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 CENPIP1-201ENST00000425713 902 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.3□□□□□ -1.4
TM4SF1P30408 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.3□□□□□ -1.4
TM4SF1P30408 AC020898.1-201ENST00000474167 787 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 RN7SL814P-201ENST00000487715 300 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 AC022133.1-201ENST00000490961 571 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 RPS24P16-201ENST00000497294 392 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
TM4SF1P30408 RN7SKP21-201ENST00000516503 220 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.3□□□□□ -1.4
TM4SF1P30408 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.3□□□□□ -1.4
TM4SF1P30408 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.3□□□□□ -1.4
TM4SF1P30408 AC022387.2-201ENST00000604050 448 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 QTRT1P1-201ENST00000604344 1078 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 AC005377.1-201ENST00000605126 456 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 AL353684.1-201ENST00000622677 1120 ntBASIC6.3□□□□□ -1.4
TM4SF1P30408 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TM4SF1P30408 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.3□□□□□ -1.4
TM4SF1P30408 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.3□□□□□ -1.4
TM4SF1P30408 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TM4SF1P30408 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
TM4SF1P30408 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.3□□□□□ -1.4
TM4SF1P30408 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.3□□□□□ -1.4
TM4SF1P30408 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TM4SF1P30408 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TM4SF1P30408 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TM4SF1P30408 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TM4SF1P30408 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.29□□□□□ -1.4
TM4SF1P30408 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TM4SF1P30408 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TM4SF1P30408 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TM4SF1P30408 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
TM4SF1P30408 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TM4SF1P30408 OR9G4-201ENST00000302957 984 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.29□□□□□ -1.4
TM4SF1P30408 RNU4-39P-201ENST00000362455 127 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 AL049697.2-201ENST00000403708 294 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 NACAP7-201ENST00000407371 609 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 SNORA77-201ENST00000408716 125 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.29□□□□□ -1.4
TM4SF1P30408 BX510359.2-201ENST00000417920 305 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 GTF2IP2-201ENST00000424290 697 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.29□□□□□ -1.4
TM4SF1P30408 RPL23AP1-201ENST00000428990 471 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TM4SF1P30408 CEACAMP6-201ENST00000452007 574 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TM4SF1P30408 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.29□□□□□ -1.4
TM4SF1P30408 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.29□□□□□ -1.4
TM4SF1P30408 AC098799.1-201ENST00000504752 800 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 RN7SKP122-201ENST00000515923 296 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.29□□□□□ -1.4
TM4SF1P30408 SOX5P1-201ENST00000524155 1127 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TM4SF1P30408 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
TM4SF1P30408 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.29□□□□□ -1.4
TM4SF1P30408 AC067805.1-201ENST00000559344 470 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 AP001357.1-201ENST00000586304 1053 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 AC098935.2-201ENST00000604222 466 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.29□□□□□ -1.4
TM4SF1P30408 AC139713.2-214ENST00000642059 1811 ntBASIC6.29□□□□□ -1.4
TM4SF1P30408 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TM4SF1P30408 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM4SF1P30408 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM4SF1P30408 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM4SF1P30408 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TM4SF1P30408 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
TM4SF1P30408 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM4SF1P30408 RSU1P3-201ENST00000412878 835 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 AC007064.3-201ENST00000422608 359 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.28□□□□□ -1.4
TM4SF1P30408 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 H3F3BP1-201ENST00000440551 403 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.28□□□□□ -1.4
TM4SF1P30408 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.28□□□□□ -1.4
TM4SF1P30408 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.28□□□□□ -1.4
TM4SF1P30408 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.28□□□□□ -1.4
TM4SF1P30408 OR52A4P-201ENST00000472867 958 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 RN7SL41P-201ENST00000476144 297 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM4SF1P30408 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
TM4SF1P30408 OR4A6P-201ENST00000534364 970 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.28□□□□□ -1.4
TM4SF1P30408 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.28□□□□□ -1.4
TM4SF1P30408 MIR4277-201ENST00000578298 84 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 AC245128.3-201ENST00000594721 748 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 AC006338.2-201ENST00000616864 791 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 MIR6853-201ENST00000619642 74 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 OR52H1-202ENST00000641796 1061 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
TM4SF1P30408 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms