Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 RNU4-39P-201ENST00000362455 127 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 RN7SKP145-201ENST00000363291 303 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 MIR585-201ENST00000384887 94 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 DPPA2P2-201ENST00000418220 897 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC013470.3-201ENST00000420252 1194 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 REREP1Y-201ENST00000422655 198 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 RNF19BPX-201ENST00000426224 625 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 AP000949.1-201ENST00000438328 629 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 REREP2Y-201ENST00000439103 200 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 MTND2P25-201ENST00000449028 610 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 RN7SL197P-201ENST00000466981 299 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC009127.1-201ENST00000467090 155 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 GLUD1P3-202ENST00000508551 200 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 RNU6-319P-201ENST00000516025 108 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC013701.1-201ENST00000522657 465 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 EIF4A2P5-201ENST00000529914 499 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC092490.3-201ENST00000545370 572 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 RN7SL356P-201ENST00000582228 248 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC010503.3-201ENST00000594355 540 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 Mico1.1-201ENST00000611698 204 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AL049539.1-201ENST00000611964 459 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC099494.2-201ENST00000623371 978 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 AL353796.1-201ENST00000561542 3241 ntBASIC5.7□□□□□ -1.5
USP41Q3LFD5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.7□□□□□ -1.5
USP41Q3LFD5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP41Q3LFD5 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP41Q3LFD5 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP41Q3LFD5 OR10AB1P-202ENST00000641219 1686 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP41Q3LFD5 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP41Q3LFD5 CASC19-281ENST00000642118 1554 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 MTHFD2P5-201ENST00000320415 844 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP41Q3LFD5 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 SEPT7P8-201ENST00000413308 775 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 MTCO1P45-201ENST00000431457 267 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 ARL5AP3-201ENST00000439327 386 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC092647.3-201ENST00000443044 633 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 MTND5P8-201ENST00000449817 1083 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC105918.1-201ENST00000474399 838 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC090114.3-201ENST00000479267 829 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 RN7SL423P-201ENST00000486202 304 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 GTF2F2P1-201ENST00000511083 675 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 EIF3KP3-201ENST00000514461 639 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 SNORA26.10-201ENST00000516427 141 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC084824.2-201ENST00000548906 345 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 AL359219.2-201ENST00000555184 348 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC010487.1-201ENST00000594408 1172 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.69□□□□□ -1.5
USP41Q3LFD5 AC005252.1-201ENST00000604518 1063 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 HMGB1P51-201ENST00000605166 638 ntBASIC5.69□□□□□ -1.5
USP41Q3LFD5 RNU6-84P-201ENST00000607737 102 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms