Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.71□□□□□ -1.34
MRE11P49959 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.71□□□□□ -1.34
MRE11P49959 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.71□□□□□ -1.34
MRE11P49959 AC008088.1-201ENST00000580993 280 ntBASIC6.71□□□□□ -1.34
MRE11P49959 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.71□□□□□ -1.34
MRE11P49959 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.71□□□□□ -1.34
MRE11P49959 AC011492.1-201ENST00000600023 315 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AL133247.2-201ENST00000603236 482 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.71□□□□□ -1.34
MRE11P49959 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 AL365400.2-201ENST00000605604 902 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AC096586.2-201ENST00000610260 441 ntBASIC6.71□□□□□ -1.34
MRE11P49959 uc_338.26-201ENST00000612659 160 ntBASIC6.71□□□□□ -1.34
MRE11P49959 RNA5SP440-201ENST00000612665 119 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AC025016.1-201ENST00000616746 682 ntBASIC6.71□□□□□ -1.34
MRE11P49959 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
MRE11P49959 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.71□□□□□ -1.34
MRE11P49959 AP003485.2-201ENST00000623636 610 ntBASIC6.71□□□□□ -1.34
MRE11P49959 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.71□□□□□ -1.34
MRE11P49959 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
MRE11P49959 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
MRE11P49959 AC109780.1-201ENST00000451768 1344 ntBASIC6.71□□□□□ -1.34
MRE11P49959 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MRE11P49959 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MRE11P49959 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.7□□□□□ -1.34
MRE11P49959 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
MRE11P49959 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MRE11P49959 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
MRE11P49959 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.7□□□□□ -1.34
MRE11P49959 AL139805.1-201ENST00000407837 289 ntBASIC6.7□□□□□ -1.34
MRE11P49959 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.7□□□□□ -1.34
MRE11P49959 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 HSFY4P-201ENST00000415994 1181 ntBASIC6.7□□□□□ -1.34
MRE11P49959 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.7□□□□□ -1.34
MRE11P49959 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.7□□□□□ -1.34
MRE11P49959 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.7□□□□□ -1.34
MRE11P49959 GAPDHP75-201ENST00000433910 943 ntBASIC6.7□□□□□ -1.34
MRE11P49959 AL020997.1-201ENST00000446554 349 ntBASIC6.7□□□□□ -1.34
MRE11P49959 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.7□□□□□ -1.34
MRE11P49959 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.7□□□□□ -1.34
MRE11P49959 YWHAEP1-201ENST00000453697 763 ntBASIC6.7□□□□□ -1.34
MRE11P49959 RPS27AP2-201ENST00000457576 465 ntBASIC6.7□□□□□ -1.34
MRE11P49959 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 RN7SL205P-201ENST00000490174 284 ntBASIC6.7□□□□□ -1.34
MRE11P49959 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.7□□□□□ -1.34
MRE11P49959 OR5H7P-201ENST00000514084 930 ntBASIC6.7□□□□□ -1.34
MRE11P49959 SETP21-201ENST00000514799 892 ntBASIC6.7□□□□□ -1.34
MRE11P49959 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.7□□□□□ -1.34
MRE11P49959 OR4A17P-201ENST00000526032 904 ntBASIC6.7□□□□□ -1.34
MRE11P49959 AL133399.1-201ENST00000527476 298 ntBASIC6.7□□□□□ -1.34
MRE11P49959 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 AC068305.2-201ENST00000550567 1205 ntBASIC6.7□□□□□ -1.34
MRE11P49959 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.7□□□□□ -1.34
MRE11P49959 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.7□□□□□ -1.34
MRE11P49959 COX6CP7-201ENST00000597056 208 ntBASIC6.7□□□□□ -1.34
MRE11P49959 AC004775.1-201ENST00000607389 753 ntBASIC6.7□□□□□ -1.34
MRE11P49959 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.7□□□□□ -1.34
MRE11P49959 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.7□□□□□ -1.34
MRE11P49959 AC079298.2-201ENST00000623885 459 ntBASIC6.7□□□□□ -1.34
MRE11P49959 AC004943.3-201ENST00000624116 600 ntBASIC6.7□□□□□ -1.34
MRE11P49959 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.7□□□□□ -1.34
MRE11P49959 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MRE11P49959 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
MRE11P49959 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
MRE11P49959 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.7□□□□□ -1.34
MRE11P49959 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.69□□□□□ -1.34
MRE11P49959 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MRE11P49959 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MRE11P49959 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
MRE11P49959 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MRE11P49959 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.69□□□□□ -1.34
MRE11P49959 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.69□□□□□ -1.34
MRE11P49959 RN7SKP160-201ENST00000363804 340 ntBASIC6.69□□□□□ -1.34
MRE11P49959 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
MRE11P49959 RN7SKP121-201ENST00000410842 305 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.69□□□□□ -1.34
MRE11P49959 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
MRE11P49959 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 FABP7P2-201ENST00000429946 379 ntBASIC6.69□□□□□ -1.34
MRE11P49959 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
MRE11P49959 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.69□□□□□ -1.34
MRE11P49959 OR2L9P-201ENST00000444456 913 ntBASIC6.69□□□□□ -1.34
MRE11P49959 SETD6P1-201ENST00000444575 317 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms