Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.98□□□□□ -1.45
CIITAP33076 AL158053.1-201ENST00000441503 453 ntBASIC5.98□□□□□ -1.45
CIITAP33076 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.98□□□□□ -1.45
CIITAP33076 NOP56P2-201ENST00000447491 769 ntBASIC5.98□□□□□ -1.45
CIITAP33076 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.98□□□□□ -1.45
CIITAP33076 AC026348.1-201ENST00000462549 1053 ntBASIC5.98□□□□□ -1.45
CIITAP33076 AC005532.2-201ENST00000467154 373 ntBASIC5.98□□□□□ -1.45
CIITAP33076 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.98□□□□□ -1.45
CIITAP33076 RPS12P31-201ENST00000491419 398 ntBASIC5.98□□□□□ -1.45
CIITAP33076 SNRPCP2-201ENST00000504370 475 ntBASIC5.98□□□□□ -1.45
CIITAP33076 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.98□□□□□ -1.45
CIITAP33076 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.98□□□□□ -1.45
CIITAP33076 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.98□□□□□ -1.45
CIITAP33076 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.98□□□□□ -1.45
CIITAP33076 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.98□□□□□ -1.45
CIITAP33076 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CIITAP33076 DNAJC19P3-201ENST00000594491 331 ntBASIC5.98□□□□□ -1.45
CIITAP33076 AC009597.2-201ENST00000604659 592 ntBASIC5.98□□□□□ -1.45
CIITAP33076 AC242628.1-201ENST00000606810 391 ntBASIC5.98□□□□□ -1.45
CIITAP33076 AC084824.5-201ENST00000612009 413 ntBASIC5.98□□□□□ -1.45
CIITAP33076 AC023510.2-201ENST00000622162 746 ntBASIC5.98□□□□□ -1.45
CIITAP33076 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.98□□□□□ -1.45
CIITAP33076 AC009452.1-201ENST00000640823 606 ntBASIC5.98□□□□□ -1.45
CIITAP33076 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CIITAP33076 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
CIITAP33076 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CIITAP33076 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CIITAP33076 PANDAR-201ENST00000629595 1506 ntBASIC5.98□□□□□ -1.45
CIITAP33076 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CIITAP33076 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CIITAP33076 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.98□□□□□ -1.45
CIITAP33076 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CIITAP33076 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CIITAP33076 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CIITAP33076 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CIITAP33076 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.97□□□□□ -1.45
CIITAP33076 SAMM50P1-201ENST00000455403 1399 ntBASIC5.97□□□□□ -1.45
CIITAP33076 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 OR9G4-201ENST00000302957 984 ntBASIC5.97□□□□□ -1.45
CIITAP33076 SNORA17.1-201ENST00000362945 126 ntBASIC5.97□□□□□ -1.45
CIITAP33076 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 SNORA48.4-201ENST00000391089 134 ntBASIC5.97□□□□□ -1.45
CIITAP33076 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 EI24P4-201ENST00000423683 1078 ntBASIC5.97□□□□□ -1.45
CIITAP33076 RPS4XP16-201ENST00000427198 791 ntBASIC5.97□□□□□ -1.45
CIITAP33076 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 MRPS33P4-201ENST00000434892 317 ntBASIC5.97□□□□□ -1.45
CIITAP33076 MTND2P40-201ENST00000436718 841 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.97□□□□□ -1.45
CIITAP33076 EEF1B2P5-201ENST00000444820 548 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.97□□□□□ -1.45
CIITAP33076 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 MORF4L1P4-201ENST00000450245 976 ntBASIC5.97□□□□□ -1.45
CIITAP33076 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 RN7SL214P-201ENST00000487317 265 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AC008953.1-201ENST00000497334 318 ntBASIC5.97□□□□□ -1.45
CIITAP33076 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 ASNSP4-201ENST00000511103 447 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AC006427.1-201ENST00000514359 712 ntBASIC5.97□□□□□ -1.45
CIITAP33076 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.97□□□□□ -1.45
CIITAP33076 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.97□□□□□ -1.45
CIITAP33076 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 AC024940.3-201ENST00000538551 316 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.97□□□□□ -1.45
CIITAP33076 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 BNIP3P27-201ENST00000599991 412 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AC073111.2-201ENST00000605657 1075 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.97□□□□□ -1.45
CIITAP33076 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CIITAP33076 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.97□□□□□ -1.45
CIITAP33076 ZNF733P-202ENST00000444809 1573 ntBASIC5.97□□□□□ -1.45
CIITAP33076 AL136520.1-201ENST00000600311 1322 ntBASIC5.97□□□□□ -1.45
CIITAP33076 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CIITAP33076 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CIITAP33076 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.96□□□□□ -1.45
CIITAP33076 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CIITAP33076 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
CIITAP33076 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.96□□□□□ -1.45
CIITAP33076 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.96□□□□□ -1.46
CIITAP33076 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 AC234781.4-201ENST00000419384 244 ntBASIC5.96□□□□□ -1.46
CIITAP33076 PTP4A1P1-201ENST00000420539 515 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms