Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COL11A1P12107 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.6□□□□□ -1.51
COL11A1P12107 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COL11A1P12107 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 RNA5SP241-201ENST00000391326 114 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 AL356967.1-201ENST00000406305 431 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 COX6CP17-201ENST00000421389 185 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.6□□□□□ -1.51
COL11A1P12107 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL11A1P12107 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AC012512.1-201ENST00000446594 718 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.6□□□□□ -1.51
COL11A1P12107 CYCSP42-201ENST00000450823 238 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 AC011005.3-201ENST00000491624 395 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.6□□□□□ -1.51
COL11A1P12107 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.6□□□□□ -1.51
COL11A1P12107 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.6□□□□□ -1.51
COL11A1P12107 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.6□□□□□ -1.51
COL11A1P12107 NDUFB4P11-201ENST00000560510 395 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.6□□□□□ -1.51
COL11A1P12107 AL133338.2-201ENST00000604292 736 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 KARSP3-201ENST00000571212 1504 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
COL11A1P12107 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL11A1P12107 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COL11A1P12107 AC007382.1-201ENST00000624376 2618 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.59□□□□□ -1.51
COL11A1P12107 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL11A1P12107 ATG4AP1-201ENST00000416893 538 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 AC092570.3-201ENST00000420113 693 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 AC009480.2-201ENST00000422916 432 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 DNAJC19P7-201ENST00000428811 344 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 CNOT7P1-201ENST00000429006 852 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 AC016772.1-201ENST00000444170 1261 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL11A1P12107 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.59□□□□□ -1.51
COL11A1P12107 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.59□□□□□ -1.51
COL11A1P12107 DPPA3P2-201ENST00000553589 478 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 MRPS21P9-201ENST00000571150 257 ntBASIC5.59□□□□□ -1.51
COL11A1P12107 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.59□□□□□ -1.51
COL11A1P12107 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL11A1P12107 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.59□□□□□ -1.51
COL11A1P12107 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
COL11A1P12107 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COL11A1P12107 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL11A1P12107 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 AC139713.2-214ENST00000642059 1811 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 TLK1P1-201ENST00000456760 2440 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL11A1P12107 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.58□□□□□ -1.52
COL11A1P12107 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 AC004690.1-201ENST00000418216 328 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 CHIAP3-201ENST00000423668 1133 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 AC097523.2-201ENST00000435551 652 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 AC090058.1-201ENST00000498788 435 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.58□□□□□ -1.52
COL11A1P12107 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.58□□□□□ -1.52
COL11A1P12107 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
COL11A1P12107 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.58□□□□□ -1.52
COL11A1P12107 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.58□□□□□ -1.52
COL11A1P12107 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.58□□□□□ -1.52
COL11A1P12107 Z95327.3-201ENST00000610385 572 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 AL121873.1-201ENST00000616013 524 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.58□□□□□ -1.52
COL11A1P12107 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.58□□□□□ -1.52
COL11A1P12107 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.58□□□□□ -1.52
COL11A1P12107 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL11A1P12107 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.58□□□□□ -1.52
COL11A1P12107 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
COL11A1P12107 AL357515.1-201ENST00000402967 542 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.58□□□□□ -1.52
COL11A1P12107 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL11A1P12107 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.58□□□□□ -1.52
COL11A1P12107 GAPDHP14-201ENST00000450472 937 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 RN7SL481P-201ENST00000477764 299 ntBASIC5.58□□□□□ -1.52
COL11A1P12107 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.58□□□□□ -1.52
COL11A1P12107 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.58□□□□□ -1.52
COL11A1P12107 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.58□□□□□ -1.52
COL11A1P12107 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.58□□□□□ -1.52
COL11A1P12107 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.58□□□□□ -1.52
COL11A1P12107 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL11A1P12107 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
COL11A1P12107 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL11A1P12107 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.57□□□□□ -1.52
COL11A1P12107 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.57□□□□□ -1.52
COL11A1P12107 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL11A1P12107 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL11A1P12107 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms