Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1BO75841 GCNT6-201ENST00000379591 934 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
UPK1BO75841 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1BO75841 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1BO75841 AC099782.1-201ENST00000425889 474 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 OR52U1P-201ENST00000439752 923 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 AC104306.1-201ENST00000449702 371 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1BO75841 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1BO75841 AC118758.1-202ENST00000454719 225 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.29□□□□□ -1.72
UPK1BO75841 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.29□□□□□ -1.72
UPK1BO75841 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1BO75841 RPL7P40-201ENST00000481703 745 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 AC012158.1-204ENST00000483430 465 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 AC108022.1-201ENST00000493466 478 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 RPS6P4-201ENST00000494693 758 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 AL136038.1-201ENST00000497246 351 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1BO75841 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.29□□□□□ -1.72
UPK1BO75841 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1BO75841 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1BO75841 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1BO75841 AC018552.1-201ENST00000562099 811 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 AC060766.1-201ENST00000590824 627 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 AC012368.3-201ENST00000604190 219 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.29□□□□□ -1.72
UPK1BO75841 AL121873.1-201ENST00000616013 524 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 MTCO1P15-201ENST00000529569 1526 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1BO75841 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
UPK1BO75841 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
UPK1BO75841 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1BO75841 AC018529.3-201ENST00000624212 2254 ntBASIC4.29□□□□□ -1.72
UPK1BO75841 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
UPK1BO75841 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
UPK1BO75841 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPK1BO75841 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.28□□□□□ -1.72
UPK1BO75841 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1BO75841 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 AL445487.1-201ENST00000415694 1580 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.28□□□□□ -1.72
UPK1BO75841 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 SNORA64.3-201ENST00000365647 134 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 SNORA70-201ENST00000384436 135 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RNU6-1263P-201ENST00000384601 106 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RNU6-1320P-201ENST00000390838 107 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RNU6-1269P-201ENST00000391139 107 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 ATP5F1P2-201ENST00000398143 760 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AL080315.1-201ENST00000406055 466 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.28□□□□□ -1.72
UPK1BO75841 RPL12P43-201ENST00000420608 499 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 Z74021.1-201ENST00000423610 407 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1BO75841 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1BO75841 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1BO75841 BX119904.1-201ENST00000432026 348 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 MAPRE1P3-201ENST00000435438 796 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 PRPF38AP2-201ENST00000438179 851 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RPS29P10-201ENST00000439197 166 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AL031681.1-201ENST00000443304 400 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AC104651.2-201ENST00000447549 528 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RPL7L1P1-201ENST00000448259 785 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 PCMTD1P3-201ENST00000451824 472 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AL121877.1-201ENST00000453704 622 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AL354872.1-201ENST00000456361 967 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 MTND6P32-201ENST00000457611 483 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 PSMC1P13-201ENST00000458195 985 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 SEPT14P1-201ENST00000458703 648 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RNU6-599P-201ENST00000459383 107 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RNU6-1193P-201ENST00000459461 107 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1BO75841 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AP001960.1-201ENST00000506494 658 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1BO75841 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1BO75841 AC027455.1-201ENST00000574104 594 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.28□□□□□ -1.72
UPK1BO75841 OR1AB1P-201ENST00000585564 761 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 AC133552.5-201ENST00000604266 540 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AC020634.1-201ENST00000608701 549 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 AL158062.1-201ENST00000619632 745 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 AC074276.2-201ENST00000619891 348 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RNU6-368P-201ENST00000620928 107 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 RNU6-538P-201ENST00000622329 107 ntBASIC4.28□□□□□ -1.72
UPK1BO75841 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1BO75841 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms