Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RAB9AP2-201ENST00000443911 597 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 RPL31P15-201ENST00000449770 338 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC093166.4-201ENST00000457867 318 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL157777.1-201ENST00000468100 304 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 RN7SL629P-201ENST00000489622 285 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC008427.1-201ENST00000503102 655 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AK4P6-201ENST00000505168 528 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC108043.1-201ENST00000512696 574 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 MIR2117-201ENST00000516780 80 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 NOP56P3-201ENST00000549457 385 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL132857.1-201ENST00000555180 708 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 BNIP3P24-201ENST00000593398 557 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC006115.2-201ENST00000596823 202 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC021851.1-201ENST00000608537 1082 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC093783.1-201ENST00000612976 329 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AP005431.1-201ENST00000618479 319 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC127024.6-201ENST00000621598 424 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 MIR6730-201ENST00000622213 67 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 OR11H2-202ENST00000641517 1085 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 OR5AC4P-202ENST00000642086 985 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 GVINP1-202ENST00000531871 7271 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 RPL23AP17-201ENST00000401064 499 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 HIGD1AP15-201ENST00000416198 280 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC093155.2-201ENST00000420734 937 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC044797.1-201ENST00000445744 679 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 RAB28P3-201ENST00000448325 597 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 EXOSC3P1-201ENST00000448649 500 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC093166.2-201ENST00000455969 1017 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC096992.1-201ENST00000459808 709 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC016687.1-201ENST00000482574 353 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 SUMO2P5-201ENST00000506790 245 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC112673.1-201ENST00000513168 575 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 RFPL4AP5-201ENST00000514977 504 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 EIF4A2P5-201ENST00000529914 499 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AL121594.2-201ENST00000541658 472 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC078880.5-201ENST00000617845 421 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AL512427.1-201ENST00000618593 349 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 FRG1DP-201ENST00000635586 771 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AC000095.2-202ENST00000637415 154 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 FBXL21-201ENST00000297158 1305 ntBASIC5.87□□□□□ -1.47
DKK3Q9UBP4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.87□□□□□ -1.47
DKK3Q9UBP4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms