Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AL138820.1-201ENST00000617901 5305 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 CHMP1B2P-201ENST00000399581 597 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AL078599.1-201ENST00000402075 293 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AL133270.1-201ENST00000402635 279 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 MTND4LP21-201ENST00000415303 295 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 RBMY2QP-201ENST00000429799 1147 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 RN7SL189P-201ENST00000468631 289 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 NDUFB5P1-201ENST00000508134 564 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 RN7SKP260-201ENST00000516907 149 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 OR5D15P-201ENST00000531671 942 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC010503.3-201ENST00000594355 540 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC119501.1-201ENST00000603646 475 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AL929601.4-201ENST00000613011 1341 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 NXF4-202ENST00000416098 1465 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 AC053481.2-202ENST00000582394 1500 ntBASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLCF1Q9UBD9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 MUC2-202ENST00000613187 4845 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 RN7SKP104-201ENST00000362605 328 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 MIR550A3-201ENST00000390735 95 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 RN7SKP114-201ENST00000410327 279 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 RPL7AP49-201ENST00000429522 581 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AL591438.1-201ENST00000433508 581 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AC090804.1-201ENST00000448870 490 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AL645937.3-201ENST00000453647 936 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AC097173.1-201ENST00000505862 819 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 GOLGA5P1-201ENST00000507317 980 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 OR1F2P-201ENST00000570470 933 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AP001542.1-201ENST00000591314 200 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AP002884.5-201ENST00000595053 1132 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AL022394.1-201ENST00000606979 292 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 OR51C1P-201ENST00000608504 942 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AL627230.1-201ENST00000613077 211 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AP005212.4-201ENST00000614206 710 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AL591926.8-201ENST00000616876 211 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 TCP11X1-202ENST00000622971 1372 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AC012078.1-201ENST00000405035 1646 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 AL513548.1-201ENST00000562904 1724 ntBASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.6□□□□□ -1.67
CLCF1Q9UBD9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms